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The next OpenCTD is here!
June 22, 2026
humpback whale in Antarctica
The evolution of the International Whaling Commission – from  whaling quotas to whale conservation
June 10, 2026
Isn’t ironic, don’t you think: dismantling the Ocean Observatories Initiative on World Oceans Day
June 9, 2026
“Why Sustainable Seafood Matters” is now available for preorder! Here’s what it’s about, and why I decided to write it.
June 8, 2026
Here’s how to join my IMCC8 symposium, “Ocean Science Communication: What’s New and What’s Next?”
April 22, 2026
Deep Sea Mining Symposium Announcement
April 21, 2026

Genetics study reveals 79 potentially new species of sharks and rays: what does it mean for science and conservation?

Posted on July 3, 2012July 3, 2012 By David Shiffman 3 Comments on Genetics study reveals 79 potentially new species of sharks and rays: what does it mean for science and conservation?
Conservation, Science

When Dr. Gavin Naylor and his team started a genetic survey of existing shark and ray species, they didn’t expect the results of their project to make international news.  Their recent paper (which, at over 250 pages and complete with more than 100 figures, is nothing short of epic), however, is too striking to ignore. The results indicate that there may be as many as 79 previously unrecognized cryptic species of sharks and rays.

A cryptic species is defined as a group that looks almost exactly like another, and may even live in the same region, but is genetically distinct. We’ve known that cryptic species of sharks and rays exist for some time, such as manta rays and scalloped hammerhead sharks, but 79 is a lot; as of the paper’s publication, only 1,221 species of sharks and rays were recognized.

According to Dr. Naylor,

“Organisms become genetically differentiated over time through the cumulative effects of mutation and recombination mediated via drift and selection. When they differentiate in isolation they eventually become so different from the parental stock from which they were derived that they can no longer produce fertile offspring when crossed with them.  Some biologists use the point of reproductive inviability as the point at which new species should be recognized…..  For practical purposes we recognize “new species” as being genetically or morphologically distinctive from previously recognized forms.”

The study’s methods, though enormous in scope, were relatively basic. According to Dr. Naylor, the study utilized a technique very familiar to geneticists: “standard DNA extraction, PCR, Sanger sequencing, alignment and analysis of a protein coding mitochondrial  gene”. To achieve the goals of understanding both evolutionary relationships of sharks and rays and parasite host specificity ( where certain parasites associated only with one species), Dr. Naylor and his team obtained and analyzed samples from as many species as they could. The numbers are impressive- 56 of 57 known families of elasmobranchs were represented among the 4,283 samples from 305 species of sharks and 269 species of batoids. In other words, this study included approximately half of all known elasmobranch species, including many that had never been analyzed genetically before. Since 1986, when the project began, samples have been obtained in more than 50 countries, mostly through the team’s own field work!

Read More “Genetics study reveals 79 potentially new species of sharks and rays: what does it mean for science and conservation?” »

An 8th grade WhySharksMatter gets career advice

Posted on July 2, 2012 By David Shiffman 3 Comments on An 8th grade WhySharksMatter gets career advice
Science

A few weeks ago, I went home to Pittsburgh to surprise my mom for Mother’s Day. While there, I had the unenviable task of emptying out my childhood bedroom in preparation for my parents moving to a smaller place. I was apparently a bit of a pack rat growing up- while cleaning the room, I found every birthday card I had received and every test I had taken from elementary school through high school.  I also found the results of my 8th grade career aptitude test, taken in 1999.

Based on my skills and interests, the “Career Futures” computer had recommended three potential careers for me: high school science teacher, military officer specializing in intelligence gathering, and marine biologist. Some of you may also know that three years later, my high school guidance counselor half-jokingly recommended that I consider a career as the leader of a cult, but that’s a story for another time.

While taking a break from cleaning out my room, I looked over the full reports for each career choice. The description of the career of a marine biologist was of particular interest, since that’s what I actually ended up doing with my life (I am definitely not secretly working as a military intelligence officer, nothing to see here, move along).

Read More “An 8th grade WhySharksMatter gets career advice” »

A field guide to ocean science and conservation on twitter

Posted on June 30, 2012June 30, 2012 By Andrew Thaler 2 Comments on A field guide to ocean science and conservation on twitter
Popular Culture

A few of my colleagues recently came to me looking for advice on how to get started on twitter. Even for seasoned marine scientists who grew up during the internet revolution, establishing a twitter presence can be a daunting task. When used well, it provides a steady stream of news, commentary, and discussion that can provide broad insight into the current state of marine science and conservation. When used poorly, twitter can become a continuous, unrelenting torrent of irrelevant nonsense, punditry, and manufactured controversy. I put this guide together to provide a foundation for those interested in using twitter to engage with the Ocean Community.

There are several great basic guides on how to get started on twitter, so, rather than reinventing the wheel, here are a few of my favorite resources:

  • What is Twitter and Why Scientists Need To Use It
  • Twitter: What’s All the Chirping About? 
  • How to live-tweet a conference: A guide for conference organizers and twitter users
  • Your 5-minute, 5-day orientation to twitter

All of these guides have some good advice, but really, the best thing you can to get a feel for twitter is to create a personal account and play around for a week or two. Always start with a personal account. You’re going to make mistakes, faux pas, or perhaps accidentally tweet something that you’d wish you hadn’t. You don’t learn to ride a bike on a Pinarello Dogma 60.1 and you shouldn’t learn to use a new social media tool on an account that will be permenently linked to your online reputation.

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A revolution in underwater exploration for everyone: the open source underwater robot

Posted on June 29, 2012June 29, 2012 By Andrew Thaler

If you’ve been following me on twitter, checking out some of my YouTube videos, or reading this blog, you probably have a good sense about how enthusiastic I am about ROV’s and how excited I am about the current wave of cheap, easy to build and maintain, functional ROV’s for outreach, teaching, and recreational exploration. Inexpensive, high quality ROV’s can provide us with previously unheard of access to the ocean.

So I’m really excited that OpenROV, an open source project to develop a robotic submarine that anyone can build and use, has  launched their kickstarter page to develop and distribute the OpenROV kit. From the project page:

Read More “A revolution in underwater exploration for everyone: the open source underwater robot” »

Watch Blue Pints Episode 2: Sea Level Rise, Seafood Fraud, Shipwrecked Aliens, and more!

Posted on June 28, 2012October 27, 2013 By Andrew Thaler
Uncategorized

Watch Episode 2 here:

httpv://www.youtube.com/watch?v=ijPEW7x93N0

Read More “Watch Blue Pints Episode 2: Sea Level Rise, Seafood Fraud, Shipwrecked Aliens, and more!” »

World Oceans Day #OceanFacts

Posted on June 26, 2012 By David Shiffman
Science

On World Oceans Day, I asked the online marine science and conservation community to tweet their favorite facts about the ocean using the hashtag #OceanFacts . Dozens of people joined the discussion, and more than 300 #OceanFacts were contributed. These tweets cover a variety of topics, from marine invertebrates, fish, sharks, and marine mammals to facts about the ocean itself and conservation policy. The discussion also inspired a great deal of humorous posts, including an entire spinoff #OceanFibs hashtag. Some of my favorite #OceanFacts tweets are saved in the Storify below.

Read More “World Oceans Day #OceanFacts” »

Check out Episode 1 of Blue Pints: shark fishing, shark finning, and finding common ground in shark conservation

Posted on June 23, 2012October 27, 2013 By Andrew Thaler 5 Comments on Check out Episode 1 of Blue Pints: shark fishing, shark finning, and finding common ground in shark conservation
Uncategorized

Sunday night at 7:30, David Shiffman and myself will host the first, of what we hope will be many, Blue Pints on Google+. The two of us will get together via Google Hangouts and broadcast a 45-minute-to-one-hour program discussing recent important issues in ocean science, while enjoying a pint of what-cures-you. We’ll provide a link to the live stream (and subsequent YouTube video) here, in this post, as well as announce it over our various social media platforms. We’ll be monitoring the comment thread on the Google+ post, so feel free to ask questions and join the discussion during the hangout.

This week, we’ll be discussing shark fishing, shark finning, and finding common ground in shark conservation. Tune in Sunday at 7:30!

Watch the video here:

httpv://www.youtube.com/watch?v=uQ_8ZtKKfjk

Read More “Check out Episode 1 of Blue Pints: shark fishing, shark finning, and finding common ground in shark conservation” »

A brief, poorly researched, history of amphibious vehicles

Posted on June 22, 2012 By Andrew Thaler
Popular Culture

James Bond had them. Baltimore’s inner harbor has them. Mitt Romney is probably building one for each of his moon mansions. From the Alligator Tug to the Boston Duck Boats, amphibious vehicles have been with us for more than a century. Which is why it’s strange to see a headline, dated June 21st, 2012, touting “WORLD’S FIRST AMPHIBIOUS CAR REVEALED“.

Now, if we want to strictly limit ourselves to production line, non-military, non-commercial vehicles (so no decommissioned beach landers or custom fanboat VW bugs), than the first amphibious vehicle was probably the Amphibicar, way back in 1965:

Amphicar im Main, am Eisernen Steg in Ffm via Wikimedia Commons
Amphicar im Main, am Eisernen Steg in Ffm via Wikimedia Commons

Notoriously leaky, not entirely stable, but still pretty swank. If Romney ever finishes building his moon mansion’s moon ocean pool for amphibious moon cars, he’ll join the ranks of former president Lyndon Johnson, who also owned an Amphibicar.

Read More “A brief, poorly researched, history of amphibious vehicles” »

Wednesday Morning Open Thread – we’re gonna need a bigger boat

Posted on June 20, 2012June 19, 2012 By Andrew Thaler 1 Comment on Wednesday Morning Open Thread – we’re gonna need a bigger boat
Uncategorized

It’s that time of the week again. Please use this space to ask questions, share links, start a discussion, or just say hi. Today’s thread brought to you by the boarding ladder on the Scripps research pier. What was your most eventful boat launch?

Saving Bimini: A campaign to protect a Bahamian gem

Posted on June 19, 2012October 27, 2013 By Guest Writer 11 Comments on Saving Bimini: A campaign to protect a Bahamian gem
Conservation

Kristine Stump is a PhD candidate in Marine Biology and Fisheries at the University of Miami’s Rosenstiel School of Marine and Atmospheric Science (RSMAS).  Her dissertation focuses on the effects of anthropogenic nursery habitat loss on juvenile lemon sharks in Bimini, Bahamas.  She was the Principal Investigator of the Bimini Biological Field Station (BBFS, or Sharklab) from 2008 – 2011 while collecting field data for her degree and has been heavily involved in the process of establishing a Marine Protected Area in Bimini.  Kristine has an M.A. in Marine Policy from RSMAS, and prior to entering the doctoral program, she spent five years working in Washington, DC at Ocean.US – the National Office for Integrated and Sustained Ocean Observations (now the NOAA IOOS Program).  In addition, she has worked for the Census of Marine Life program office at the Consortium for Ocean Leadership in Washington, DC. 

 

There is an apex predator roaming the seas.  For hundreds of thousands of years, this beast has hunted in the waters of the world’s oceans.  Relentless is it in its search along the shorelines for that which satisfies its primal urges.  Its numbers ever on the rise, the destruction in its path knows no bounds.  And now, in 2012, it wants to dominate the sea more than ever before: it wants glass-bottom bungalows.  It needs yacht dockage at its vacation home.  It craves manicured fairways.  IT MUST HAVE AN INFINITY POOL!

If you haven’t already guessed, the apex predator here is man.  Throughout history, the environment has shaped man, but now more than ever, man is shaping the environment.  In the current era of environmental awareness, however, we have learned that there are limits to the anthropogenic changes ecosystems can withstand while still maintaining ecosystem function.  Luckily, we have learned to implement mitigation strategies to offset, to some degree, the negative effects of human expansion.

Read More “Saving Bimini: A campaign to protect a Bahamian gem” »

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