population genetics – Southern Fried Science

Watch the Sharks International 2014 Keynote Presentations!

September 23, 2014 David Shiffman 2 Comments

Science

In June of 2014, almost 400 of the world’s top shark researchers gathered in Durban, South Africa for the 2nd Sharks International conference. The four keynote presentations have just been put online.

Beyond Jaws: Rediscovering the “lost sharks” of South Africa

Dave Ebert, Moss Landing Marine Laboratory

Biography:Dave Ebert earned his Masters Degree at Moss Landing Marine Labs and his Ph.D. at Rhodes University, Grahamstown, South Africa. He is currently the Program Director for the Pacific Shark Research Center, a research faculty member at Moss Landing Marine Laboratories, and an honorary research associate for the South African Institute for Aquatic Biodiversity and the California Academy of Sciences Department of Ichthyology. He has been researching chondrichthyans around the world for nearly three decades, focusing his research on the biology, ecology and systematics of this enigmatic fish group. He has authored 13 books, including a popular field guide to the sharks of the world and most recently he revised the Food and Agriculture Organization’s Catalogue of Sharks of the World. He has published over 300 scientific papers and book chapters, and contributed approximately 100 IUCN Shark Specialist Group Red List species assessments. Dave is regional co-Chair of the IUCN Northeast Pacific Regional Shark Specialist Group, Vice Chair for taxonomy, and a member of the American Elasmobranch Society and Oceania Chondrichthyan Society. He has supervised more than 30 graduate students, and enjoys mentoring and helping develop aspiring marine biologists.

Are sandbar sharks more like bowhead whales or cod?

May 24, 2010December 20, 2011 David Shiffman 1 Comment

Conservation, Science

At first glance, the question posed in the title seems silly. Both cod and sandbar sharks are fish, therefore they must be more similar to each other than either are to bowhead whales (which are mammals). However, a recent conservation genetics paper has demonstrated that one aspect of a sandbar shark’s life history is more similar to that of bowhead whales: both sandbar sharks and bowhead whales have an effective size that is very similar to their census size.

Crowdsourcing ConGen – A Reading List

May 18, 2010June 16, 2010 Andrew Thaler 1 Comment

Conservation, Science

This is a little different from my usual Crowdsourcing ConGen posts. I recently completed my qualifying exams for PhD candidacy, so have a very large reading list compiled for population and conservation genetics. So, if you’re interested in the field, you should check out some of these papers, and if you know of any others that should be included, please let me know in the comments.

Crowdsourcing ConGen – Populations in Hardy-Weinberg Equilibrium

March 27, 2010April 4, 2010 Andrew Thaler

Conservation, Science

This post is part of the Crowdsourcing ConGen project. Crowdsourcing is the process of opening up a resource to a community for input and contributions. Throughout the coming year I’ll be posting manageable pieces of this document for the audience of Southern Fried Science to read and review. Please visit the main post for an overview.

“I have never done anything useful. No discovery of mine has made, or is likely to make, directly or indirectly, for good or ill, the least difference to the amenity of the world.” ~ Godfrey Harold Hardy

The simplest model for a population is one in which the frequencies of alleles and genotypes remains constant from generation to generation. Under this model, there are no outside forces influencing selection, there is no tendency for any allele or genotype to be favored over any other, diploid alleles will recombine randomly in accordance with Mendelian inheritance. A population that behaves this way is said to be in Hardy-Weinberg Equilibrium. This almost never happens.