Science – Page 50 – Southern Fried Science

New app: Learn about great white sharks while supporting research

January 11, 2012 David Shiffman 4 Comments

Science

Earlier today, the Marine Conservation Science Institute launched a new iPhone and iPad app focusing on great white sharks. The app, called Expedition White Shark , includes numerous features that let users learn more about these amazing animals.

A game (called “Shark Life”) lets you learn about the life history of great white sharks by controlling a virtual baby great white. Users explore the marine environment near Southern California white eating fish and avoiding threats like gillnets and pollution.

A “news” interface lets you keep up to date on some of the latest exciting discoveries the Marine CSI team makes, and you can learn more about great whites from the “facts” tab. The app also includes numerous photos and videos of great whites and the research team in action.The coolest feature this app contains, however, is the ability to track satellite-tagged great whites.

Updates from the Deep: New and Noteworthy in Hydrothermal Vent Research

January 10, 2012January 12, 2012 Andrew Thaler 7 Comments

Conservation, Science

From hairy-chested yeti crabs to the deepest known fields, hydrothermal vents have been enjoying a bit of science celebrity in the last few weeks. Beneath the headlines, there has been an eruption of vent-related research published in the scientific literature and some exciting new expeditions just left port.

The Discovery of New Deep-Sea Hydrothermal Vent Communities in the Southern Ocean and Implications for Biogeography

'Hoff' crabs in paradise. Image from ChEss Southern Ocean Consortium

The exhaustive author list on this paper reads like a who’s who in hydrothermal vent biogeography. This is the paper that introduced “the Hoff” crab to the world, but the findings are far more significant. Hydrothermal vent systems are sorted into biogeographic provinces, with different regions supporting different communities. The iconic giant tube worms dominate the eastern Pacific, while the western Pacific (prominently featured in Deep Fried Sea) plays host to fist sized snails, and the Atlantic features shrimp as its dominant species. There are several missing gaps in our understanding of how these qualitatively different communities are connected – the Southern Ocean, the south Atlantic, the Indian Ocean, and the Cayman Trough, among others. Filling in these gaps in our knowledge can help us understand the history and evolution of hydrothermal vent ecosystems.

What hybrid sharks mean (and don’t mean) for climate change and evolution: fact-checking the media coverage

January 6, 2012January 6, 2012 David Shiffman 37 Comments

Conservation, Science

OLYMPUS DIGITAL CAMERA — Photo credit: study author Pascal Geraghty, New South Wales Department of Primary Industry

Last week, a team of 10 Australian scientists announced that they had found the world’s first “shark hybrids”, offspring of individuals from two different shark species which had interbred. During a routine survey of Australian marine life, 57 sharks were found that physically resembled one species of shark, but had genetic markers inconsistent with that species. Subsequent genetic investigation revealed that these 57 animals were hybrids between common blacktip sharks (Carcharhinus limbatus) and Australian blacktip sharks (C. tilstoni).

Some of these hybrids were “F1″, meaning that one parents was a common blacktip and one was an Australian blacktip. Others were “B+”(backcrossed), which means that one parent was a common blacktip/Australian blacktip hybrid, and the other was a “purebreed” of one of those two species. According to the study’s lead author, Dr. Jess Morgan of the University of Queensland, “our genetic marker tells us that these hybrids are ‘at least’ F1, and that these animals are reproductively viable and can produce an F2…the hybrids may be generations past F2 but the existing genetic markers can’t distinguish how many generations past the second cross have occurred.”

That sinking feeling: Hog lagoons, superbugs, and the proliferation of antibiotics in livestock

January 2, 2012January 2, 2012 Andrew Thaler 9 Comments

Science

From here, it looks like such a lovely pond. Photo by Andrew David Thaler

The murky brown water was still, reflecting, perfectly, the drifting clouds above. Had I not known what it was, an acre-wide manmade pond almost a dozen feet deep filled to the brim with hog feces, I might be tempted to describe it as “beautiful”. Hog lagoons like this are a common sight in North Carolina, though their use is in decline. My lab group arrived at this particular lagoon to take microbial samples, fungi in this case, from the steaming cauldron of organic waste: an ideal culture medium. Carefully, we loaded a small skiff and rowed out into the stink. Near the center, we gingerly dipped our sampling vials, affixed to the end of an old fishing pole, into the dense fluid. It was then that we noticed the rising waterline, the slow trickle at the stern, the shift in balance. We locked the oars and rowed, frantically, towards shore. Our labmates on shore had, thankfully, tied a line to the bow before we departed. The skiff’s gunwales were creeping closer and closer to the water. We were sinking. We were sinking in a lake of pig shit.

The Connected Professor

January 2, 2012December 31, 2011 Bluegrass Blue Crab

Science

Here at SFS, we seem to have an affinity for cyborgs. I recently had a dream in which I envisioned my future as such a creature. I had aged, achieved a professorship, and was teaching an introductory geography class. Contrary to the current classroom, however, there was not a learned scholar standing in front of pupils transferring information from my brain to theirs through lecture and leading discussions. Instead, there was a flurry of multimedia flying around the room and the “lecture” was really a snippet of a semester-long conversation involving the entire class intended to immerse them in geographic thinking, in and out of class. My thoughts and the in-person conversation was immediately digitized and encoded to be connected to parallel tweets, emails, blogs, and other online content.

Read More “The Connected Professor” »

The top 10 shark conservation stories of 2011

December 28, 2011 David Shiffman 17 Comments

Conservation, Science

Caribbean reef shark, Bimini. Photo credit: David Shiffman

2011 was a relatively good year for sharks and rays. Presented below, in no particular order, are ten important shark conservation stories from the past year.

1. Shark sanctuaries. The world gained several new shark sanctuaries, areas where shark fishing is banned, in 2011. Nations creating new shark sanctuaries include Honduras (~92,000 square miles), the Bahamas (~240,000 square miles), Marshall Islands/Guam/Palau (a regional partnership protecting almost 2 million square miles). Numerous concerns about enforcing rules in these huge areas, as well as concerns about potential loopholes in the policies, exist among conservation scientists.

2. Fin bans. These laws ban the possession, trade, or sale of shark fins within the boundaries of a city, state/territory, or country. In 2011, Hawaii’s first-in-the-US fin ban took effect, and a few other US states (California, Washington, and Oregon) passed similar laws. There is an ongoing debate in the shark conservation community about whether blanket bans on finning are better than promoting best practices (i.e. more sustainable shark fishing techniques). Additionally, some are concerned that we aren’t focusing enough on other threats to sharks like bycatch and habitat destruction.

National Marine Fisheries Service rejects petition to list 4 skate species under Endangered Species Act

December 27, 2011 David Shiffman 8 Comments

Conservation, Science

Last August, two petitions were sent to the National Marine Fisheries Service from three conservation organizations (the Animal Welfare Institute, WildEarth Guardians and Friends of Animals). The petitions (available in their entirety here) requested that four species of skate be listed as “threatened” or “endangered” under the Endangered Species Act, and requested that critical habitat for these species be designated and appropriately protected. These species are the thorny skate, barndoor skate, winter skate, and smooth skate.

Due to both a directed fishery (skate wings are used for lobster trap bait, and also for food for a primarily-overseas market that includes Europe) and bycatch in bottom fisheries , Northwest Atlantic populations of these species have experienced serious declines in recent years. While some skate species have rebounded (for reasons that are not entirely clear), The thorny skate remains particularly threatened- the IUCN Red List considers the subpopulation off the Northeastern U.S. coast to be Critically Endangered. It is illegal for U.S. fishermen to keep thorny skates they catch (and has been since 2004), but they are commonly taken as bycatch in fisheries for the other skates and groundfish.

Yesterday, the National Marine Fisheries Service formally responded to the petition (thorny skate and other skates), and the news isn’t good for skates:

“After reviewing the information contained in the petition and information readily available in our files, we conclude that the petition fails to present substantial scientific or commercial information indicating that the petitioned action concerning barndoor, smooth and/or winter skate may be warranted…We find that the petitions do not present substantial scientific information indicating the petitioned actions may be warranted. Accordingly, we will not initiate a review of the status of thorny skate at this time.”

The National Marine Fisheries Service listed several reasons why they believe these skates should not be listed under the Endangered Species Act.

Mining the Deep Sea: what’s it worth?

December 13, 2011December 15, 2011 Andrew Thaler

Conservation, Science

a fragment of a hydrothermal vent — The shimmering insides of a vent chimney

In Jules Verne’s 20,000 Leagues Under the Sea*, the iconic Captain Nemo announced that “in the depths of the ocean, there are mines of zinc, iron, silver and gold that would be quite easy to exploit” while predicting that the abundance of marine resources could satisfy human need. If the pace of development for deep-sea mining projects and the estimated value of deep-sea ores is any indicator, it seems as though our misanthropic mariner was wrong on both counts.

In The abundance of seafloor massive sulfide deposits, an international team of geologists attempts to quantify the total available copper and zinc contained in deep-sea massive sulfide mounds. Seafloor massive sulfide mounds are a byproduct of the processes that create deep-sea hydrothermal vents. As super-heated sea water emerges from the vent, it deposits heavy metals and other elements and minerals along the walls of the vent. Over thousands of years, an active vent field can build up a huge mound of metal and mineral rich ore – a massive sulfide mound. In addition to copper and zinc, these mounds can contain gold and silver. Generally, the ore is of much higher quality than its terrestrial counterpart. Over the last few decades, many exploration companies were eyeing these deposits, but it’s only recently that technological developments and economic incentives have aligned to permit potentially profitable deep-sea mining.

Saving Nemo: 1 out of 6 species that appear in Finding Nemo are threatened with extinction

December 12, 2011December 13, 2011 David Shiffman 3 Comments

Conservation, Popular Culture, Science

Nemo edited — WhySharksMatter found Nemo at Disney's Living Seas Aquarium

Like most marine biology geeks, I’m a huge fan of Disney/Pixar’s “Finding Nemo”. In addition to a heartwarming story of a father trying to bring his son home to their aneme…anemeneme… amenememe… anemone, the film showcases an enormous variety of beautiful real-life coral reef species. According to research published today in Conservation Letters, however, we may soon only be able to see some of these animals in the movies. The paper, titled “Extinction Risk and Bottlenecks in the Conservation of Charismatic Marine Species”, concluded that many of the stars of Finding Nemo are in deep trouble.

Open thread for NOAA scientists to speak freely about scientific and technical matters based on their official work without approval from the public affairs office or their supervisors.

December 8, 2011 Andrew Thaler 1 Comment

Science

Yesterday the National Oceanic and Atmospheric Association (NOAA) released their new scientific integrity policy, which specifically states that: “To support a culture of openness, one of the policy’s key provisions affirms unequivocally that NOAA scientists may speak freely with the media and public about scientific and technical matters based on their official work without approval … Read More “Open thread for NOAA scientists to speak freely about scientific and technical matters based on their official work without approval from the public affairs office or their supervisors.” »